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Rectal culture

Rectal culture is a lab test to identify bacteria and other germs in the rectum that can cause gastrointestinal symptoms and disease.

A cotton swab is placed into the rectum. The swab is rotated gently, and removed.

A smear of the swab is placed in culture media to encourage the growth of bacteria and other organisms. The culture is watched for growth.

The organisms can be identified when growth is seen. may be done to determine the best treatment.

The health care provider does a rectal exam and collects the specimen.

There may be pressure as the swab is inserted into the rectum. The test is not painful in most cases.

The test is done if your provider suspects that you have an infection of the rectum, such as  or chlamydia. It may also be done instead of a if it is not possible to get a specimen of feces.

The rectal culture may also be performed in a hospital or nursing home setting. This test shows if someone carries vancomycin-resistant enterococcus (VRE) in their intestine. This germ can be spread to other patients.

Finding bacteria and other germs that are commonly found in the body is normal.

Normal value ranges may vary slightly among different labs. Talk to your provider about the meaning of your specific test results.

Abnormal results may mean you have an infection. This may be:

  • Bacterial infection
  • Parasitic enterocolitis
  • Gonorrhea
  • Sometimes a culture shows that you are a carrier, but you may not have an infection.

    A related condition is .

    There are no risks.

    Batteiger BE, Tan M. Chlamydia trachomatis (trachoma and urogenital infections). In: Bennett JE, Dolin R, Blaser MJ, eds. Mandell, Douglas, and Bennett's Principles and Practice of Infectious Diseases. 9th ed. Philadelphia, PA: Elsevier; 2020:chap 180.

    Marrazzo JM, Apicella MA. Neisseria gonorrhoeae (Gonorrhea). In: Bennett JE, Dolin R, Blaser MJ, eds. Mandell, Douglas, and Bennett's Principles and Practice of Infectious Diseases. 9th ed. Philadelphia, PA: Elsevier; 2020:chap 212.

    Melia JMP, Sears CL. Infectious enteritis and proctocolitis. In: Feldman M, Friedman LS, Brandt LJ, eds. Sleisenger and Fordtran's Gastrointestinal and Liver Disease. 11th ed. Philadelphia, PA: Elsevier; 2021:chap 110.

    Plourde AR, Beavis KG. Specimen collection and handling for diagnosis of infectious diseases. In: McPherson RA, Pincus MR, eds. Henry's Clinical Diagnosis and Management by Laboratory Methods. 24th ed. Philadelphia, PA: Elsevier; 2022:chap 66.

    Siddiqi HA, Rabinowitz S, Axiotis CA. Laboratory diagnosis of gastrointestinal and pancreatic disorders. In: McPherson RA, Pincus MR, eds. Henry's Clinical Diagnosis and Management by Laboratory Methods. 24th ed. Philadelphia, PA: Elsevier; 2022:chap 23.

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    Review Date: 5/6/2022

    Reviewed By: Michael M. Phillips, MD, Emeritus Professor of Medicine, The George Washington University School of Medicine, Washington, DC. Also reviewed by David C. Dugdale, MD, Medical Director, Brenda Conaway, Editorial Director, and the A.D.A.M. Editorial team.